STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106580630Protein L-Myc-1b-like. (387 aa)    
Predicted Functional Partners:
LOC106607551
N-myc proto-oncogene protein-like isoform X1.
    
0.495
LOC106571147
N-myc proto-oncogene protein-like isoform X1.
    
0.495
trrap
Transformation/transcription domain-associated protein isoform X8; Belongs to the PI3/PI4-kinase family.
    
 
 0.439
LOC106608825
Lysine-specific demethylase 6B-like isoform X1.
   
 0.434
LOC106563383
Lysine-specific demethylase 6B-like.
   
 0.434
LOC106577775
Lysine-specific demethylase 6B-like.
   
 0.434
LOC106603203
Lysine-specific demethylase 6B-like isoform X1.
   
 0.434
LOC106575616
Lysine-specific demethylase 6A-like isoform X2.
   
 0.432
kdm6a
Lysine-specific demethylase 6A isoform X1.
   
 0.432
ENSSSAP00000021289
Lysine-specific demethylase 6A-like.
   
  0.424
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.