STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106576291Uncharacterized protein LOC106576291. (900 aa)    
Predicted Functional Partners:
LOC106592447
NF-kappa-B essential modulator-like.
    
 0.799
LOC106599735
Receptor-interacting serine/threonine-protein kinase 1-like isoform X1.
   
 0.798
ripk1
Receptor-interacting serine/threonine-protein kinase 1.
   
 0.798
LOC106562229
Tumor necrosis factor receptor type 1-associated DEATH domain protein-like.
    
 0.784
LOC106587422
Tumor necrosis factor receptor type 1-associated DEATH domain protein.
    
 0.784
LOC106610821
Tumor necrosis factor alpha-induced protein 3-like.
    
 0.753
tnfaip3
Tumor necrosis factor alpha-induced protein 3 isoform X2.
    
 0.753
LOC106599747
ranBP-type and C3HC4-type zinc finger-containing protein 1-like isoform X1.
    
 0.687
LOC106569144
ranBP-type and C3HC4-type zinc finger-containing protein 1-like isoform X3.
    
 0.687
nsmaf
Protein FAN.
    
 0.685
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (14%) [HD]