STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SELENBP1Selenium-binding protein 1 isoform X1. (533 aa)    
Predicted Functional Partners:
LOC106584721
Sulfide:quinone oxidoreductase, mitochondrial-like.
     
  0.900
LOC106574568
Selenium-binding protein 1-like isoform X3.
  
  
 
0.900
LOC106609228
Adenosylhomocysteinase.
     
 0.895
ahcyl2
Adenosylhomocysteinase.
     
 0.895
LOC106572868
Adenosylhomocysteinase.
     
 0.895
LOC106573363
Putative adenosylhomocysteinase 3 isoform X1.
     
 0.895
mtr
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
 0.872
ahcy
Adenosylhomocysteinase.
     
 0.864
LOC106593678
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
     
 0.835
LOC106586691
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
     
 0.835
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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