STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106610533Uncharacterized protein LOC106610533. (1261 aa)    
Predicted Functional Partners:
ENSSSAP00000047017
SH3 domain-containing RING finger protein 3-like.
    
 0.529
LOC106586408
SH3 domain-containing RING finger protein 3-like.
    
 0.529
LOC106586407
SH3 domain-containing RING finger protein 3-like.
    
 0.529
LOC106612220
SH3 domain-containing RING finger protein 3-like isoform X1.
    
 0.529
hdac1
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.526
LOC106570688
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.526
LOC106604953
Histone deacetylase 3.
    
 0.526
hdac3
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.526
hdac2
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.526
LOC106610811
Probable histone deacetylase 1-B.
    
 0.526
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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