STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pruneProtein prune homolog isoform X1. (408 aa)    
Predicted Functional Partners:
PRUNE1
Protein prune homolog isoform X1.
  
  
 
0.901
LOC106574077
Protein prune homolog.
  
  
 
0.901
LOC106562627
guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase MESH1-like.
     
  0.900
LOC106587812
guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase MESH1-like.
     
  0.900
LOC106587628
guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase MESH1-like.
     
  0.900
utp20
Small subunit processome component 20 homolog.
      
 0.595
asl
Argininosuccinate lyase.
     
 0.591
sprtn
sprT-like domain-containing protein Spartan.
      
 0.575
LOC106612798
Adenine phosphoribosyltransferase-like isoform X1.
     
 0.513
ENSSSAP00000079039
Adenine phosphoribosyltransferase.
     
 0.513
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.