STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106561315Achaete-scute homolog 1b-like. (177 aa)    
Predicted Functional Partners:
tcf12
Transcription factor 12 isoform X1.
   
 0.671
ENSSSAP00000009658
annotation not available
   
 0.671
HTF4
Transcription factor 12.
   
 0.671
LOC106572247
Transcription factor 4-like.
   
 0.671
ENSSSAP00000044510
annotation not available
   
 0.671
ENSSSAP00000044733
annotation not available
   
 0.671
LOC106613772
Transcription factor E2-alpha-like isoform X4.
   
 0.671
ENSSSAP00000090739
annotation not available
   
 0.671
ENSSSAP00000090760
annotation not available
   
 0.671
TCF4
Transcription factor 4 isoform X1.
   
 0.671
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.