STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106606055Bcl-2/adenovirus E1B 19 kDa-interacting protein 2-like protein. (243 aa)    
Predicted Functional Partners:
LOC106560722
Kelch-like protein 8 isoform X1.
      
 0.511
LOC106568509
Kelch-like protein 8.
      
 0.511
LOC106587266
Cytoplasmic tRNA 2-thiolation protein 2; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). May act by forming a heterodimer with CTU1/ATPBD3 that ligates sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position.
      
 0.478
ENSSSAP00000094257
Cytosolic thiouridylase subunit 2 homolog (S. pombe).
      
 0.478
scnm1
Sodium channel modifier 1 isoform X1.
      
 0.446
vcpip1
Deubiquitinating protein VCIP135.
      
 0.442
LOC106599449
Deubiquitinating protein VCIP135-like.
      
 0.442
ENSSSAP00000027103
Growth factor, augmenter of liver regeneration (ERV1 homolog, S. cerevisiae).
    
 
 0.436
GFER
Sulfhydryl oxidase.
    
 
 0.436
LOC106588016
C2 calcium-dependent domain-containing protein 4C-like.
      
 0.400
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.