STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106610543Sodium channel and clathrin linker 1-like. (356 aa)    
Predicted Functional Partners:
kiz
Centrosomal protein kizuna isoform X2.
    
  0.894
LOC106561819
Guanine nucleotide exchange factor for Rab-3A-like isoform X4.
     
 0.756
LOC106584776
Guanine nucleotide exchange factor for Rab-3A-like isoform X1.
     
 0.756
CEP83
Centrosomal protein of 83 kDa-like isoform X1.
   
 0.668
lrrc45
Leucine-rich repeat-containing protein 45 isoform X1.
    
 
 0.635
c2cd3
C2 domain-containing protein 3 isoform X2.
    
 0.631
ofd1
Oral-facial-digital syndrome 1 protein.
   
  
 0.623
cep164
Centrosomal protein of 164 kDa isoform X3.
   
 0.621
ENSSSAP00000027189
annotation not available
   
 0.621
LOC106580815
Centrosomal protein of 164 kDa-like isoform X1.
   
 0.621
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.