STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fjx1Four-jointed box protein 1. (427 aa)    
Predicted Functional Partners:
LOC106581345
Protocadherin Fat 3-like.
   
 
 0.737
fat3
Protocadherin Fat 3 isoform X3.
   
 
 0.737
LOC106585353
AN1-type zinc finger protein 5-like.
      
 0.723
LOC106580064
AN1-type zinc finger protein 5-like isoform X1.
      
 0.723
LOC106585353-2
AN1-type zinc finger protein 5-like isoform X1.
      
 0.723
LOC106563919
Protocadherin Fat 3-like.
   
 
 0.689
LOC106573758
Choline kinase alpha-like.
      
 0.663
kpna4
Karyopherin subunit alpha 4.
      
 0.630
LOC106604622
Protocadherin Fat 4-like.
   
 
 0.598
LOC106612434
Protocadherin Fat 4-like isoform X1.
   
 
 0.598
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.