LOC106603509 protein (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC106603509

Adenosine receptor A2b-like. (363 aa)

Predicted Functional Partners:

LOC106566693

0.953

LOC106590334

0.835

GNAL

0.835

LOC106596458

0.791

GNG2

0.638

gbg2

0.638

gng4

0.638

LOC106564840

0.621

bola3

0.621

bcmo1

0.572

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GNAL	GNG2	ENSSSAP00000111640	ENSSSAP00000062889	Guanine nucleotide-binding protein G(olf) subunit alpha-like.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.808
GNAL	LOC106603509	ENSSSAP00000111640	ENSSSAP00000008066	Guanine nucleotide-binding protein G(olf) subunit alpha-like.	Adenosine receptor A2b-like.	0.835
GNAL	gbg2	ENSSSAP00000111640	ENSSSAP00000098345	Guanine nucleotide-binding protein G(olf) subunit alpha-like.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.808
GNAL	gng4	ENSSSAP00000111640	ENSSSAP00000103279	Guanine nucleotide-binding protein G(olf) subunit alpha-like.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.808
GNG2	GNAL	ENSSSAP00000062889	ENSSSAP00000111640	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Guanine nucleotide-binding protein G(olf) subunit alpha-like.	0.808
GNG2	LOC106566693	ENSSSAP00000062889	ENSSSAP00000009349	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Guanine nucleotide-binding protein G(S) subunit alpha-like.	0.808
GNG2	LOC106590334	ENSSSAP00000062889	ENSSSAP00000061889	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Guanine nucleotide-binding protein G(Olf) subunit alpha isoform X1.	0.808
GNG2	LOC106596458	ENSSSAP00000062889	ENSSSAP00000051674	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Guanine nucleotide-binding protein G(Olf) subunit alpha-like.	0.800
GNG2	LOC106603509	ENSSSAP00000062889	ENSSSAP00000008066	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Adenosine receptor A2b-like.	0.638
LOC106564840	LOC106603509	ENSSSAP00000085760	ENSSSAP00000008066	Kinesin-like protein KIF16B isoform X2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Adenosine receptor A2b-like.	0.621
LOC106564840	bcmo1	ENSSSAP00000085760	ENSSSAP00000104538	Kinesin-like protein KIF16B isoform X2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Beta-carotene 15,15'-monooxygenase 1.	0.566
LOC106564840	bola3	ENSSSAP00000085760	ENSSSAP00000091657	Kinesin-like protein KIF16B isoform X2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Salmo salar BolA-like protein 3 (bola3), mRNA.	0.621
LOC106566693	GNG2	ENSSSAP00000009349	ENSSSAP00000062889	Guanine nucleotide-binding protein G(S) subunit alpha-like.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.808
LOC106566693	LOC106603509	ENSSSAP00000009349	ENSSSAP00000008066	Guanine nucleotide-binding protein G(S) subunit alpha-like.	Adenosine receptor A2b-like.	0.953
LOC106566693	gbg2	ENSSSAP00000009349	ENSSSAP00000098345	Guanine nucleotide-binding protein G(S) subunit alpha-like.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.808
LOC106566693	gng4	ENSSSAP00000009349	ENSSSAP00000103279	Guanine nucleotide-binding protein G(S) subunit alpha-like.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.808
LOC106590334	GNG2	ENSSSAP00000061889	ENSSSAP00000062889	Guanine nucleotide-binding protein G(Olf) subunit alpha isoform X1.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.808
LOC106590334	LOC106603509	ENSSSAP00000061889	ENSSSAP00000008066	Guanine nucleotide-binding protein G(Olf) subunit alpha isoform X1.	Adenosine receptor A2b-like.	0.835
LOC106590334	gbg2	ENSSSAP00000061889	ENSSSAP00000098345	Guanine nucleotide-binding protein G(Olf) subunit alpha isoform X1.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.808
LOC106590334	gng4	ENSSSAP00000061889	ENSSSAP00000103279	Guanine nucleotide-binding protein G(Olf) subunit alpha isoform X1.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.808