STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106561560Carboxypeptidase A1-like isoform X2. (410 aa)    
Predicted Functional Partners:
lxn
Latexin precursor.
    
 
 0.741
LOC106572326
Chymotrypsin-like elastase family member 2A; Belongs to the peptidase S1 family.
   
 
 0.521
LOC106572163
Chymotrypsin-like elastase family member 2A; Belongs to the peptidase S1 family.
   
 
 0.513
ENSSSAP00000083684
annotation not available
   
 
 0.513
LOC106582553
Calcium-responsive transcription factor-like isoform X1.
      
 0.511
agt
Angiotensinogen precursor; Belongs to the serpin family.
   
 
  0.506
ENSSSAP00000004093
annotation not available
   
 
 0.500
LOC106565388
Chymotrypsin-like elastase family member 2A; Belongs to the peptidase S1 family.
   
 
 0.500
LOC106566163
Elastase-1-like.
   
 
 0.500
LOC106566159
Elastase-1; Acts upon elastin; Belongs to the peptidase S1 family. Elastase subfamily.
   
 
 0.500
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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