STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106601851Cytochrome P450 2K1-like isoform X1; Belongs to the cytochrome P450 family. (504 aa)    
Predicted Functional Partners:
aasdh
acyl-CoA synthetase family member 4 isoform X1.
  
 0.735
wrn
Werner syndrome ATP-dependent helicase isoform X2.
    
 0.707
LOC106593876
Cytochrome P450 3A27-like.
  
 0.639
LOC106594529
Cytochrome P450 3A27-like.
  
 0.626
exo1
Exonuclease 1.
   
 0.592
ENSSSAP00000064605
annotation not available
    
 0.590
LOC106582297
BRCA1-associated RING domain protein 1-like isoform X1.
    
 0.590
rad50
DNA repair protein RAD50.
    
 0.570
ENSSSAP00000052911
annotation not available
  
 0.559
LOC106608464
Cytochrome P450 26B1-like; Belongs to the cytochrome P450 family.
  
 0.555
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.