STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106601033Complement C1q-like protein 2. (262 aa)    
Predicted Functional Partners:
C1QC-2
Complement C1q subcomponent subunit C-like.
   
 0.599
il4ra
Interleukin-4 receptor alpha chain isoform X1.
    
 0.468
ENSSSAP00000060018
annotation not available
    
 0.468
tep1
Telomerase protein component 1.
    
 0.457
LOC106569686
Neurocan core protein-like.
    
 0.452
ncan
Neurocan core protein.
    
 0.452
LOC106613725
Neurocan core protein-like.
    
 0.452
LOC106600559
Neurocan core protein-like.
    
 0.452
ENSSSAP00000052499
Dihydropyrimidinase.
      
 0.429
dpys
Dihydropyrimidinase isoform X1.
      
 0.429
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.