STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106602263Polycystin-2-like isoform X1. (823 aa)    
Predicted Functional Partners:
LOC106589455
Polycystin-1-like isoform X1.
    
0.976
LOC106562168
Polycystic kidney disease protein 1-like 2.
    
 
0.778
LOC106587186
Polycystic kidney disease protein 1-like 2.
    
 
0.778
LOC106593771
Exocyst complex component 5.
     
 0.734
exoc5
Exocyst complex component 5.
     
 0.734
LOC106609608
Exocyst complex component 4-like isoform X1.
     
 0.697
trpc1
Short transient receptor potential channel 1; Belongs to the transient receptor (TC 1.A.4) family.
    
 
 0.593
LOC106593828
Translocation protein SEC63 homolog isoform X2.
    
 
 0.591
LOC106561819
Guanine nucleotide exchange factor for Rab-3A-like isoform X4.
     
 0.581
LOC106584776
Guanine nucleotide exchange factor for Rab-3A-like isoform X1.
     
 0.581
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.