STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106609779Low affinity vacuolar monovalent cation/H(+) antiporter-like isoform X1; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (762 aa)    
Predicted Functional Partners:
LOC106595192
Transmembrane and coiled-coil domain-containing protein 3-like.
      
 0.595
LOC106560271
GDT1 family protein.
    
 
 0.524
LOC106584122
GDT1 family protein.
    
 
 0.524
LOC106576147
Plasma membrane calcium-transporting ATPase 1-like isoform X2.
    
 
 0.518
LOC106572032
Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.
    
 
 0.518
ENSSSAP00000041141
Plasma membrane calcium-transporting ATPase 1-like.
    
 
 0.518
LOC106566841
Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.
    
 
 0.518
ENSSSAP00000059946
annotation not available
    
 
 0.518
atp2b2
Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.
    
 
 0.518
ENSSSAP00000066692
Plasma membrane calcium-transporting ATPase 2.
    
 
 0.518
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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