STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000008134annotation not available (638 aa)    
Predicted Functional Partners:
LOC106569367
Heterogeneous nuclear ribonucleoprotein C-like isoform X1.
   
 
 0.659
LOC106577997
Heterogeneous nuclear ribonucleoprotein C-like isoform X1.
   
 
 0.659
LOC106600345
Heterogeneous nuclear ribonucleoprotein C-like isoform X1.
   
 
 0.659
ENSSSAP00000095420
annotation not available
   
 
 0.659
LOC106598314
RNA-binding Raly-like protein isoform X3.
    
 
 0.507
LOC106587383
RNA-binding Raly-like protein isoform X1.
    
 
 0.507
LOC106582628
RNA-binding protein Raly-like.
    
 
 0.507
ralyl
RNA-binding Raly-like protein isoform X1.
    
 
 0.507
LOC106565059
RNA-binding protein Raly-like isoform X2.
    
 
 0.507
bic1a
Bicaudal C homolog 1-A.
   
 
 0.440
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.