STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106601036Uncharacterized protein C17orf104 homolog isoform X2. (837 aa)    
Predicted Functional Partners:
LOC106563247
Probable ATP-dependent RNA helicase YTHDC2.
    
 
 0.638
YTHDC2
Uncharacterized protein LOC106609103 isoform X4.
    
 
 0.638
SYDE1
Rho GTPase-activating protein SYDE1-like.
      
 0.594
rbm46
Probable RNA-binding protein 46.
      
 0.510
rec8
Meiotic recombination protein REC8 homolog isoform X3.
     
 0.510
LOC106613968
Rho GTPase-activating protein SYDE1-like.
      
 0.493
nepro
Uncharacterized protein C3orf17 homolog isoform X1.
      
 0.469
maip1
Uncharacterized protein C2orf47 homolog, mitochondrial isoform X1.
      
 0.416
uvssa
UV-stimulated scaffold protein A isoform X1.
      
 0.416
LOC106582066
Uncharacterized protein C2orf47 homolog, mitochondrial-like.
      
 0.416
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.