STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tfptTCF3 fusion partner. (209 aa)    
Predicted Functional Partners:
ino80e
INO80 complex subunit E isoform X1.
   
 0.983
ENSSSAP00000085107
annotation not available
   
 0.983
actr8
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize (By similarity); Belongs to the actin family. ARP8 subfamily.
    
 0.980
LOC106608272
DNA helicase INO80-like isoform X2.
   
 0.958
mcrs1
Microspherule protein 1.
   
 0.932
LOC106583247
Microspherule protein 1-like.
   
 0.932
LOC106566696
Actin-related protein 5-like isoform X3.
    
 0.930
INO80C
INO80 complex subunit C.
    
 0.930
LOC106574865
INO80 complex subunit C-like.
    
 0.930
actr5
Actin-related protein 5; Belongs to the actin family.
    
 0.930
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.