STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106561478Dickkopf-related protein 3-like. (280 aa)    
Predicted Functional Partners:
LOC106606127
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
 0.653
LOC106566129
Zinc finger protein GLI1-like.
     
 0.644
gli1
Zinc finger protein GLI1.
     
 0.644
kremen1
Kremen protein 1 isoform X2.
    
 0.632
LOC106563099
Drebrin-like protein.
      
 0.628
NFATC1
Nuclear factor of activated T-cells, cytoplasmic 1-like isoform X1.
      
 0.622
LOC106588230
Nuclear factor of activated T-cells, cytoplasmic 1-like isoform X1.
      
 0.622
LOC106590018
BMP and activin membrane-bound inhibitor homolog; Negatively regulates TGF-beta signaling. Belongs to the BAMBI family.
      
 0.622
NFATC1-2
Nuclear factor of activated T-cells, cytoplasmic 1-like isoform X1.
      
 0.622
LOC106578551
BMP and activin membrane-bound inhibitor homolog; Negatively regulates TGF-beta signaling. Belongs to the BAMBI family.
      
 0.622
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.