STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000008301annotation not available (71 aa)    
Predicted Functional Partners:
LOC106592174
IQ calmodulin-binding motif-containing protein 1-like.
    
 
 0.612
NPHP4
Nephrocystin-4 isoform X3.
      
 0.596
cdpf1
Cysteine-rich DPF motif domain-containing protein 1.
      
 0.594
ENSSSAP00000090665
Chromosome 19 open reading frame 54.
      
 0.593
C8orf37
Protein C8orf37 homolog isoform X1.
      
 0.573
hypk
Huntingtin-interacting protein K.
      
 0.495
LOC106585853
Ataxin-2-like isoform X5.
   
  
 0.492
LOC106580186
Ataxin-2-like isoform X12.
   
  
 0.492
cc2d2a
Coiled-coil and C2 domain-containing protein 2A isoform X1.
      
 0.485
b9d1
B9 domain-containing protein 1.
      
 0.480
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.