STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ltbp1Latent-transforming growth factor beta-binding protein 1 isoform X1. (1718 aa)    
Predicted Functional Partners:
LOC106608163
Thrombospondin-1-like.
   
 
 0.907
LOC106610834
Thrombospondin-1-like.
   
 
 0.907
LOC106587655
Thrombospondin-1-like.
   
 
 0.907
LOC106571097
Thrombospondin-1-like.
   
 
 0.907
LOC100136559
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.904
LOC106613337
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.904
LOC106563563
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.904
LOC106576950
Latent-transforming growth factor beta-binding protein 1-like isoform X3.
  
  
 
0.900
LOC106604392
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.852
LOC106612106
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.852
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.