STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000008326annotation not available (250 aa)    
Predicted Functional Partners:
LOC106606250
39S ribosomal protein L12, mitochondrial-like isoform X1.
   
  
 0.806
ef-1g
Elongation factor 1-gamma.
   
 
 0.789
ENSSSAP00000065087
Eukaryotic translation elongation factor 1 gamma.
   
 
 0.789
gars1
glycine--tRNA ligase.
  
  
 0.737
ND1
NADH-ubiquinone oxidoreductase chain 1; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity).
  
  
 0.732
mrps6
28S ribosomal protein S6, mitochondrial.
  
  
 0.711
ENSSSAP00000056516
Ts translation elongation factor, mitochondrial.
   
  
 0.664
EPRS1
Bifunctional glutamate/proline--tRNA ligase-like.
  
  
 0.647
LOC106561878
Bifunctional glutamate/proline--tRNA ligase-like isoform X1.
  
  
 0.647
yars1
Tyrosine--tRNA ligase.
  
  
 0.623
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.