STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106602283Methylcytosine dioxygenase TET2-like. (1917 aa)    
Predicted Functional Partners:
OGT
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X4.
   
 
 0.590
LOC106604253
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit-like isoform X8.
   
 
 0.590
LOC106590004
AT-rich interactive domain-containing protein 4B-like.
   
 
 0.583
LOC106578775
AT-rich interactive domain-containing protein 4B-like isoform X1.
   
 
 0.583
arid4a
AT-rich interactive domain-containing protein 4A.
   
 
 0.583
LOC106611238
AT-rich interactive domain-containing protein 4A-like isoform X4.
   
 
 0.583
ENSSSAP00000103251
AT-rich interactive domain-containing protein 4B-like.
   
 
 0.583
gpr84
G-protein coupled receptor 84.
      
 0.511
ttc6
Tetratricopeptide repeat protein 6 isoform X1.
   
 
 0.489
LOC106566823
Putative Polycomb group protein ASXL1 isoform X1.
      
 0.483
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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