STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cgnl1Cingulin-like protein 1. (1323 aa)    
Predicted Functional Partners:
LOC106570193
Rho guanine nucleotide exchange factor 2-like isoform X1.
     
 0.941
LOC106580371
Rho guanine nucleotide exchange factor 2-like isoform X3.
     
 0.941
LOC106605464
Rho guanine nucleotide exchange factor 2-like isoform X1.
     
 0.941
tjp1
Tight junction protein ZO-1 isoform X3; Belongs to the MAGUK family.
    
 0.928
LOC106587244
Tight junction protein ZO-1-like isoform X14; Belongs to the MAGUK family.
    
 0.928
LOC106561768
Tight junction protein ZO-1-like.
    
 0.928
LOC106587244-2
Tight junction protein ZO-1-like isoform X11; Belongs to the MAGUK family.
    
 0.928
trappc1
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.844
LOC106612982
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.757
LOC106581112
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.757
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.