STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106601861Nuclear GTPase SLIP-GC-like isoform X1. (826 aa)    
Predicted Functional Partners:
LOC106612605
Glutamate--cysteine ligase catalytic subunit-like isoform X2.
   
 0.744
gsh1
Glutamate--cysteine ligase catalytic subunit isoform X1.
   
 0.744
LOC106588673
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
     
 0.506
adhfe1
Hydroxyacid-oxoacid transhydrogenase, mitochondrial isoform X1.
   
 0.473
dkga
2,5-diketo-D-gluconic acid reductase A isoform X1.
  
 0.454
LOC106603097
Voltage-gated potassium channel subunit beta-3-like isoform X4.
  
 0.454
kcnab2
Voltage-gated potassium channel subunit beta-2 isoform X1.
  
 0.454
ENSSSAP00000074558
Potassium voltage-gated channel, shaker-related subfamily, beta member 2 a.
  
 0.454
ENSSSAP00000074813
Potassium voltage-gated channel, shaker-related subfamily, beta member 1 a.
  
 0.454
LOC100194670
Aldo-keto reductase family 7 member A5-like.
  
 0.454
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.