STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ampm1Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). (393 aa)    
Predicted Functional Partners:
rpl17
60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
  
 
 0.936
ENSSSAP00000018194
annotation not available
    
 
 0.916
rs15
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 
 0.906
RL23A
60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
  
 
 0.894
rl23
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
  
 
 0.894
LOC106601262
60S ribosomal protein L23.
  
 
 0.894
ENSSSAP00000075673
annotation not available
  
 
 0.894
LOC106570388
60S ribosomal protein L35.
  
 
 0.883
rpl35
Ribosomal protein L35.
  
 
 0.883
LOC106579982
60S ribosomal protein L35-like.
  
 
 0.883
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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