STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000008408annotation not available (326 aa)    
Predicted Functional Partners:
TR112
TRM112-like protein.
   
 0.643
ENSSSAP00000067342
annotation not available
   
 0.643
ccdc34
Coiled-coil domain-containing protein 34 isoform X1.
    
 
 0.616
ccdc150
Coiled-coil domain-containing protein 150 isoform X2.
      
 0.599
LOC106583209
Selenocysteine-specific elongation factor-like isoform X1.
   
 0.598
rs15
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
    
  0.577
bysl
Bystin-like.
   
 0.573
ENSSSAP00000118277
annotation not available
   
 0.573
LOC106581168
LOW QUALITY PROTEIN: pre-rRNA-processing protein TSR1 homolog.
   
 0.568
LOC106613038
pre-rRNA-processing protein TSR1 homolog.
   
 0.568
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.