STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106565270Stathmin-3-like. (251 aa)    
Predicted Functional Partners:
SNTA1
Alpha-1-syntrophin-like isoform X2.
    
 
 0.886
LOC106565275
TOX high mobility group box family member 2-like isoform X2.
    
 0.886
snta1
Alpha-1-syntrophin.
    
 
 0.851
LOC106583657
TOX high mobility group box family member 2-like isoform X1.
    
 0.843
LOC106563484
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
 
 0.774
LOC106603148
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
 
 0.774
SLC32A1
Vesicular inhibitory amino acid transporter-like.
   
 
 0.770
LOC106566112
Vesicular inhibitory amino acid transporter.
   
 
 0.769
KIF5A
Kinesin heavy chain isoform 5A-like; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.762
LOC106567879
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2-like.
     
 0.745
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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