STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tp53inp2Tumor protein p53-inducible nuclear protein 2 isoform X1. (310 aa)    
Predicted Functional Partners:
gbrap
Gamma-aminobutyric acid receptor-associated protein.
   
 0.932
gabarapl2
Gamma-aminobutyric acid receptor-associated protein-like 2.
   
 0.932
LOC106602900
Gamma-aminobutyric acid receptor-associated protein.
   
 0.932
LOC106577557
Gamma-aminobutyric acid receptor-associated protein-like.
   
 0.932
LOC106612997
Vacuole membrane protein 1-like isoform X1.
     
 0.929
tmm49
Transmembrane protein 49 isoform X1.
     
 0.929
LOC106603519
Vacuole membrane protein 1-like isoform X2.
     
 0.929
grl1
Gamma-aminobutyric acid receptor-associated protein-like 1.
    
 0.920
LOC106576832
Gamma-aminobutyric acid receptor-associated protein-like 1.
    
 0.920
t53i2
Tumor protein p53-inducible nuclear protein 2.
     
  0.900
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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