STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106563588Diamine acetyltransferase 1-like. (172 aa)    
Predicted Functional Partners:
LOC106611136
Ornithine decarboxylase 1-like; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.941
odc1
Ornithine decarboxylase 1; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.941
srm
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
    
 0.937
agmat
Agmatinase, mitochondrial isoform X1; Belongs to the arginase family.
  
 
 0.930
LOC106581942
Amine oxidase.
     
 0.908
LOC106586788
Amine oxidase.
     
 0.908
LOC106590278
Amine oxidase.
     
 0.903
mif
Macrophage migration inhibitory factor.
   
  
 0.671
LOC100136498
Macrophage migration inhibitory factor.
   
  
 0.671
paox
Peroxisomal N(1)-acetyl-spermine/spermidine oxidase.
      
 0.577
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.