STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106564018Carbohydrate sulfotransferase. (430 aa)    
Predicted Functional Partners:
ENSSSAP00000024615
annotation not available
     
 0.651
LOC100136494
Decorin; May affect the rate of fibrils formation.
     
 0.651
Pgs2
Decorin.
     
 0.651
ENSSSAP00000068135
annotation not available
     
 0.651
chst7
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.598
hykk
Hydroxylysine kinase.
      
 0.595
LOC106592094
Carbohydrate sulfotransferase 15-like.
      
 0.590
LOC106605320
Brevican core protein-like isoform X1.
     
 0.575
LOC106580754
Aggrecan core protein-like isoform X2.
     
 0.575
chst15
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.557
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.