STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106563226Bromodomain-containing protein 3-like isoform X5. (683 aa)    
Predicted Functional Partners:
LOC106563227
WD repeat-containing protein 5.
   
 
 0.783
gem-2
GTP-binding protein GEM.
    
 0.732
LOC106605946
GTP-binding protein GEM-like.
    
 0.732
gem
GTP-binding protein GEM.
    
 0.732
LOC106612701
Neuroblast differentiation-associated protein AHNAK-like isoform X2.
    
 
 0.726
ENSSSAP00000063326
Neuroblast differentiation-associated protein AHNAK-like.
    
 
 0.726
dmap1
DNA methyltransferase 1-associated protein 1 isoform X2.
    
 
 0.722
taf7
Transcription initiation factor TFIID subunit 7.
    
 
 0.719
ENSSSAP00000109872
TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 
 0.719
LOC106563227-2
WD repeat-containing protein 5.
   
 
 0.709
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.