STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106564422arf-GAP with dual PH domain-containing protein 1-like. (107 aa)    
Predicted Functional Partners:
LOC106579048
Leucine-rich repeat-containing protein 18-like.
    
 
 0.596
LOC106589845
Ribosomal protein S6 kinase delta-1-like isoform X1.
      
 0.587
LOC106611054
Uncharacterized protein LOC106611054 isoform X1.
      
 0.587
LOC106596820
Kinesin-like protein KIF16B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.533
ENSSSAP00000043871
annotation not available
    
 
 0.533
LOC106608308
Kinesin-like protein KIF13B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.533
LOC106567792
Kinesin-like protein KIF13B isoform X2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.533
LOC106610714
Kinesin-like protein KIF13B isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.533
LOC106571044
Kinesin-like protein KIF13B isoform X6; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.533
ENSSSAP00000066519
annotation not available
    
 
 0.533
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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