STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106605043Protein dopey-1-like isoform X2. (2485 aa)    
Predicted Functional Partners:
LOC106560994
Protein MON2 homolog isoform X2.
   
 
 0.946
LOC106584500
Protein MON2 homolog isoform X9.
   
 
 0.946
slc66a2
PQ-loop repeat-containing protein 1 isoform X1.
    
 
 0.476
LOC106587961
PQ-loop repeat-containing protein 1-like.
    
 
 0.476
SLC66A2
Solute carrier family 66 member 2.
    
 
 0.476
LOC106560875
PQ-loop repeat-containing protein 1-like isoform X1.
    
 
 0.476
LOC106573699
PQ-loop repeat-containing protein 1-like isoform X2.
    
 
 0.476
mrps6
28S ribosomal protein S6, mitochondrial.
      
 0.443
LOC106573249
Mitochondrial inner membrane protease subunit 2-like isoform X1.
      
 0.439
LOC106607411
Coiled-coil domain-containing protein 103-like.
   
 
 0.430
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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