STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mfsd8Major facilitator superfamily domain-containing protein 8. (514 aa)    
Predicted Functional Partners:
LOC106574194
SPX domain-containing membrane protein At4g11810-like.
     
 
0.900
LOC106568744
Major facilitator superfamily domain-containing protein 8-like.
     
 
0.900
LOC106560515
Thrombopoietin receptor-like isoform X1.
    
 0.670
LOC106584017
Thrombopoietin receptor-like.
    
 0.670
cln3
Battenin.
    
 
 0.612
ENSSSAP00000022566
annotation not available
      
 0.601
cln5
Ceroid-lipofuscinosis neuronal protein 5.
      
 0.601
tpp1
Tripeptidyl-peptidase 1 precursor.
      
 0.601
mfsd1
Major facilitator superfamily domain-containing protein 1.
   
  
 0.601
LOC106570032
Palmitoyl-protein thioesterase 1-like.
      
 0.601
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.