STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000008650annotation not available (186 aa)    
Predicted Functional Partners:
riok2
Serine/threonine-protein kinase RIO2.
   
 0.987
imp3
U3 small nucleolar ribonucleoprotein protein IMP3.
   
 0.983
bysl
Bystin-like.
   
 0.981
ENSSSAP00000118277
annotation not available
   
 0.981
LOC106562814
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
   
 0.976
NOB1
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
   
 0.976
LOC106581168
LOW QUALITY PROTEIN: pre-rRNA-processing protein TSR1 homolog.
   
 0.972
LOC106613038
pre-rRNA-processing protein TSR1 homolog.
   
 0.972
nop14
Nucleolar protein 14 isoform X1.
   
 
 0.969
cenph
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
   
 
 0.966
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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