STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106608487Butyrophilin subfamily 1 member A1-like. (383 aa)    
Predicted Functional Partners:
LOC106594193
Butyrophilin subfamily 2 member A1-like.
      
 0.723
ENSSSAP00000060149
Myelin-oligodendrocyte glycoprotein-like.
      
 0.723
LOC106562992
polyubiquitin-B.
   
 0.527
mex3b
RNA-binding protein MEX3B.
    
 0.522
LOC106574475
ELAV-like protein; Belongs to the RRM elav family.
    
 
 0.517
LOC106574070
ELAV-like protein; Belongs to the RRM elav family.
    
 
 0.517
LOC106613578
ELAV-like protein; Belongs to the RRM elav family.
    
 
 0.517
ELAVL1
ELAV-like protein; Belongs to the RRM elav family.
    
 
 0.517
LOC106566155
Biogenesis of lysosome-related organelles complex 1 subunit 1.
      
 0.505
bloc1s1
Lysosome-related ORGANELLE complex-1 subunit 1.
      
 0.505
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.