STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106567825NF-kappa-B inhibitor alpha-like. (396 aa)    
Predicted Functional Partners:
LOC106592447
NF-kappa-B essential modulator-like.
    
 0.915
LOC106607598
NF-kappa-B inhibitor alpha-like.
  
0.895
LOC106601178
NF-kappa-B inhibitor alpha-like.
  
0.893
LOC106571222
NF-kappa-B inhibitor alpha-like.
  
0.892
LOC106611175
NF-kappa-B inhibitor alpha-like.
  
0.892
LOC106608684
Putative transcription factor p65 homolog.
   
 0.858
LOC106591996
Proto-oncogene c-Rel-like.
   
 0.858
ENSSSAP00000025111
Transcription factor p65-like.
   
 0.858
LOC106577316
Proto-oncogene c-Rel-like.
   
 0.858
relb
Transcription factor RelB isoform X1.
   
 0.858
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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