STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106566694Piezo-type mechanosensitive ion channel component. (2026 aa)    
Predicted Functional Partners:
tipin
TIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family.
   
 
 0.897
timeless
Protein timeless homolog.
    
 
 0.891
wdhd1
WD repeat and HMG-box DNA-binding protein 1 isoform X1.
   
 
 0.851
mcm4
DNA helicase; Belongs to the MCM family.
   
 0.812
LOC106569128
DNA helicase; Belongs to the MCM family.
   
 0.812
cdc45
CDC45-related protein.
    
 0.766
ENSSSAP00000046253
CDC45 cell division cycle 45 homolog (S. cerevisiae).
    
 0.766
LOC106585648
Serine/threonine-protein kinase Chk2-like isoform X2.
    
 
 0.754
LOC106580118
Serine/threonine-protein kinase Chk2-like isoform X1.
    
 
 0.754
LOC106571378
DNA helicase MCM9-like; Belongs to the MCM family.
   
 0.720
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.