STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ube2ql1Ubiquitin-conjugating enzyme E2Q-like protein 1. (288 aa)    
Predicted Functional Partners:
LOC106572481-2
Ubiquitin-conjugating enzyme E2 variant 1 isoform X2.
     
 0.776
LOC106572481
Ubiquitin-conjugating enzyme E2 variant 1 isoform X1.
     
 0.776
ENSSSAP00000041153
annotation not available
     
 0.776
ube2g2
Ubiquitin-conjugating enzyme E2 G2; Belongs to the ubiquitin-conjugating enzyme family.
     
 0.771
ube2l3
Ubiquitin-conjugating enzyme E2 L3-like; Belongs to the ubiquitin-conjugating enzyme family.
     
0.736
ATG7
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 as well as the ATG8 family proteins for their conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Required for autophagic death induced by caspase-8 inhibition. Required for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria [...]
    
 0.708
LOC106591739
Probable ubiquitin-conjugating enzyme E2 W-B.
     
 0.675
ENSSSAP00000064832
annotation not available
     
 0.675
ube2j1
Ubiquitin-conjugating enzyme E2 J1.
     
 0.672
LOC106571293
Ubiquitin-conjugating enzyme E2 J1-like isoform X2.
     
 0.672
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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