STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HoxB1aaHomeobox protein HoxB1aa. (316 aa)    
Predicted Functional Partners:
pbx2
Pre-B-cell leukemia transcription factor 2.
    
 0.800
LOC106581981
pre-B-cell leukemia transcription factor 1-like.
    
 0.800
LOC106564206
pre-B-cell leukemia transcription factor 1-like.
    
 0.795
LOC106607421
pre-B-cell leukemia transcription factor 1-like isoform X1.
    
 0.795
LOC106600918
pre-B-cell leukemia transcription factor 1-like isoform X1.
    
 0.795
LOC106560332
pre-B-cell leukemia transcription factor 1 isoform X2.
    
 0.795
LOC106579892
pre-B-cell leukemia transcription factor 3-like isoform X10.
    
 0.795
LOC106584178
pre-B-cell leukemia transcription factor 1 isoform X1.
    
 0.795
LOC106599262
pre-B-cell leukemia transcription factor 1-like isoform X3.
    
 0.795
LOC106569198
pre-B-cell leukemia transcription factor 1-like isoform X2.
    
 0.795
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.