STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmtc3Transmembrane and TPR repeat-containing protein 3. (934 aa)    
Predicted Functional Partners:
LOC106604380
Integrator complex subunit 5-like.
    
 0.916
cl011
CL011 protein.
   
 0.903
LOC106576392
Protein asunder homolog isoform X2.
   
 0.903
LOC106588323
Integrator complex subunit 3 isoform X2.
    
 0.884
LOC106569880
Integrator complex subunit 3-like isoform X2.
    
 0.884
ints10
Integrator complex subunit 10.
   
 0.867
ENSSSAP00000113759
annotation not available
   
 0.867
ints9
Integrator complex subunit 9 isoform X2.
  
 0.822
ENSSSAP00000105998
annotation not available
  
 0.822
LOC106595167
Integrator complex subunit 1-like.
    
 0.812
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.