STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106565269Helicase with zinc finger domain 2-like. (2846 aa)    
Predicted Functional Partners:
exosc10
Exosome component 10.
   
 0.989
exosc7
Exosome complex exonuclease RRP42.
   
 0.986
exosc1
Exosome complex component CSL4 isoform X1.
   
 0.985
exosc8
Exosome complex component RRP43.
   
 0.983
exosc5
Exosome complex component RRP46 isoform X1.
   
 0.983
exosc3
Exosome complex component RRP40.
   
 0.981
exos4
Exosome complex exonuclease RRP41.
   
 0.961
LOC106566956
Exosome complex component RRP4-like.
   
 0.961
exosc6
Exosome complex exonuclease MTR3.
   
 0.961
exos2
Exosome complex exonuclease RRP4.
   
 0.961
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.