STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cbx6Chromobox protein 6. (111 aa)    
Predicted Functional Partners:
RNF2
E3 ubiquitin-protein ligase RING2-like isoform X1.
    
 0.867
rng2a
E3 ubiquitin-protein ligase RING2-A.
    
 0.867
LOC106569745
E3 ubiquitin-protein ligase RING2.
    
 0.867
RING1
E3 ubiquitin-protein ligase RING2-A-like isoform X2.
    
 0.867
LOC106564949
Polycomb complex protein BMI-1-like.
    
 0.824
LOC106587926
Polycomb complex protein BMI-1-like.
    
 0.824
LOC106568664
Polycomb complex protein BMI-1-B-like isoform X1.
    
 0.824
LOC106578384
Polycomb complex protein BMI-1-A-like.
    
 0.824
bmi1a
Polycomb complex protein BMI-1-A isoform X1.
    
 0.824
LOC106606673
Chromobox protein homolog 8-like isoform X1.
  
 
0.800
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.