STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106608492Uncharacterized protein LOC106608492. (191 aa)    
Predicted Functional Partners:
LOC106569776
Uncharacterized protein LOC106569776 isoform X4.
  
     0.524
LOC106608851
Embryonal Fyn-associated substrate-like isoform X1.
  
     0.502
LOC106577796
Embryonal Fyn-associated substrate-like.
  
     0.495
hepc1
Hepcidin-1 precursor.
  
     0.492
ENSSSAP00000054367
annotation not available
  
     0.471
LOC106605686
Apolipoprotein C-II-like.
  
     0.467
ENSSSAP00000017489
annotation not available
  
     0.467
LOC106584591
Hepcidin-1; Seems to act as a signaling molecule involved in the maintenance of iron homeostasis. Seems to be required in conjunction with HFE to regulate both intestinal iron absorption and iron storage in macrophages. May also have antimicrobial activity (By similarity). Belongs to the hepcidin family.
  
     0.452
LOC106582666
DNA damage-inducible transcript 3 protein-like.
  
     0.450
LOC106561598
Antimicrobial peptide NK-lysin-like.
  
     0.446
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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