STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106593505Axin-1-like. (397 aa)    
Predicted Functional Partners:
ctnnb1
Catenin beta-1.
   
 0.929
LOC106611977
Casein kinase I isoform alpha isoform X1; Belongs to the protein kinase superfamily.
    
 0.846
LOC106604944
Casein kinase I isoform alpha isoform X2; Belongs to the protein kinase superfamily.
    
 0.846
LOC106573931
Adenomatous polyposis coli protein 2-like.
   
 0.838
apc2
Adenomatous polyposis coli protein 2.
   
 0.838
apc
Adenomatous polyposis coli protein isoform X1.
   
 0.838
LOC106568367
Adenomatous polyposis coli protein-like isoform X1.
   
 0.838
ENSSSAP00000006163
annotation not available
   
 0.810
LOC106600820
Junction plakoglobin-like isoform X1.
   
 0.810
LOC106564751
Junction plakoglobin-like.
   
 0.810
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.