cnot3 protein (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

cnot3

LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 3. (955 aa)

Predicted Functional Partners:

LOC106561350

0.986

LOC106603492

0.981

cnot8

0.981

ENSSSAP00000080004

0.979

cnot9

0.974

LOC106575212

0.974

LOC106574282

0.974

LOC106609840

0.952

CNOT4

0.952

LOC106561643

0.952

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CNOT4	ENSSSAP00000080004	ENSSSAP00000092461	ENSSSAP00000080004	CCR4-NOT transcription complex subunit 4-like isoform X1.	CCR4-NOT transcription complex, subunit 1.	0.981
CNOT4	LOC106561350	ENSSSAP00000092461	ENSSSAP00000054826	CCR4-NOT transcription complex subunit 4-like isoform X1.	CCR4-NOT transcription complex subunit 1-like isoform X11.	0.987
CNOT4	LOC106561643	ENSSSAP00000092461	ENSSSAP00000114568	CCR4-NOT transcription complex subunit 4-like isoform X1.	CCR4-NOT transcription complex subunit 4-like isoform X2.	0.900
CNOT4	LOC106574282	ENSSSAP00000092461	ENSSSAP00000106875	CCR4-NOT transcription complex subunit 4-like isoform X1.	Cell differentiation protein RCD1 homolog isoform X2.	0.981
CNOT4	LOC106575212	ENSSSAP00000092461	ENSSSAP00000062003	CCR4-NOT transcription complex subunit 4-like isoform X1.	Cell differentiation protein RCD1 homolog isoform X1.	0.981
CNOT4	LOC106603492	ENSSSAP00000092461	ENSSSAP00000011316	CCR4-NOT transcription complex subunit 4-like isoform X1.	CCR4-NOT transcription complex subunit 7 isoform X2.	0.986
CNOT4	LOC106609840	ENSSSAP00000092461	ENSSSAP00000010867	CCR4-NOT transcription complex subunit 4-like isoform X1.	CCR4-NOT transcription complex subunit 4-like.	0.901
CNOT4	cnot3	ENSSSAP00000092461	ENSSSAP00000008908	CCR4-NOT transcription complex subunit 4-like isoform X1.	LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 3.	0.952
CNOT4	cnot8	ENSSSAP00000092461	ENSSSAP00000064611	CCR4-NOT transcription complex subunit 4-like isoform X1.	CCR4-NOT transcription complex subunit 8.	0.986
CNOT4	cnot9	ENSSSAP00000092461	ENSSSAP00000040506	CCR4-NOT transcription complex subunit 4-like isoform X1.	Cell differentiation protein RCD1 homolog isoform X1.	0.981
ENSSSAP00000080004	CNOT4	ENSSSAP00000080004	ENSSSAP00000092461	CCR4-NOT transcription complex, subunit 1.	CCR4-NOT transcription complex subunit 4-like isoform X1.	0.981
ENSSSAP00000080004	LOC106561643	ENSSSAP00000080004	ENSSSAP00000114568	CCR4-NOT transcription complex, subunit 1.	CCR4-NOT transcription complex subunit 4-like isoform X2.	0.981
ENSSSAP00000080004	LOC106574282	ENSSSAP00000080004	ENSSSAP00000106875	CCR4-NOT transcription complex, subunit 1.	Cell differentiation protein RCD1 homolog isoform X2.	0.981
ENSSSAP00000080004	LOC106575212	ENSSSAP00000080004	ENSSSAP00000062003	CCR4-NOT transcription complex, subunit 1.	Cell differentiation protein RCD1 homolog isoform X1.	0.981
ENSSSAP00000080004	LOC106603492	ENSSSAP00000080004	ENSSSAP00000011316	CCR4-NOT transcription complex, subunit 1.	CCR4-NOT transcription complex subunit 7 isoform X2.	0.986
ENSSSAP00000080004	LOC106609840	ENSSSAP00000080004	ENSSSAP00000010867	CCR4-NOT transcription complex, subunit 1.	CCR4-NOT transcription complex subunit 4-like.	0.981
ENSSSAP00000080004	cnot3	ENSSSAP00000080004	ENSSSAP00000008908	CCR4-NOT transcription complex, subunit 1.	LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 3.	0.979
ENSSSAP00000080004	cnot8	ENSSSAP00000080004	ENSSSAP00000064611	CCR4-NOT transcription complex, subunit 1.	CCR4-NOT transcription complex subunit 8.	0.986
ENSSSAP00000080004	cnot9	ENSSSAP00000080004	ENSSSAP00000040506	CCR4-NOT transcription complex, subunit 1.	Cell differentiation protein RCD1 homolog isoform X1.	0.981
LOC106561350	CNOT4	ENSSSAP00000054826	ENSSSAP00000092461	CCR4-NOT transcription complex subunit 1-like isoform X11.	CCR4-NOT transcription complex subunit 4-like isoform X1.	0.987