STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sigmar1Sigma non-opioid intracellular receptor 1. (222 aa)    
Predicted Functional Partners:
peam3
Phosphoethanolamine N-methyltransferase 3.
   
 0.999
LOC106570209
Lanosterol 14-alpha demethylase-like; Belongs to the cytochrome P450 family.
   
 
 0.987
LOC106579093
Squalene monooxygenase-like.
   
 
 0.987
SQLE
Squalene monooxygenase-like.
   
 
 0.987
LOC106588568
Lanosterol 14-alpha demethylase isoform X1; Belongs to the cytochrome P450 family.
   
 
 0.987
LOC106591002
Probable ergosterol biosynthetic protein 28.
   
 
 0.986
ERG28
Probable ergosterol biosynthetic protein 28.
   
 
 0.986
LOC106571452
lamin-B receptor-like isoform X1.
   
 
 0.959
LOC106587139
7-dehydrocholesterol reductase-like.
   
 
 0.959
ENSSSAP00000062017
Transmembrane 7 superfamily member 2.
   
 
 0.959
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.