STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106603502ER membrane protein complex subunit 6. (110 aa)    
Predicted Functional Partners:
emc4
ER membrane protein complex subunit 4; May mediate anti-apoptotic activity.
   
 0.982
tmm32
Membrane magnesium transporter 1.
   
 0.977
LOC106586058
Membrane magnesium transporter 1-like isoform X1.
   
 0.977
LOC106605058
ER membrane protein complex subunit 2-like.
   
 0.975
tmm85
ER membrane protein complex subunit 4; Belongs to the EMC4 family.
   
 
 0.974
LOC106587369
ER membrane protein complex subunit 8-like.
   
 0.973
LOC106566299
ER membrane protein complex subunit 1-like.
    
 0.964
k0090
K0090 protein precursor.
    
 0.964
ENSSSAP00000048785
ER membrane protein complex subunit 2.
   
 
 0.964
EMC8
ER membrane protein complex subunit 8.
   
 
 0.959
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.