STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hxb7aHomeobox protein Hox-B7a. (223 aa)    
Predicted Functional Partners:
hoxb6aa
Homeobox protein HoxB6aa.
  
 
0.910
hoxb6ab
Homeobox protein HoxB6ab.
  
 
0.909
hoxa7aa
Homeobox protein Hox-A7; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis; Belongs to the Antp homeobox family.
  
 
0.909
hoxb6ba
Homeobox protein HoxB6ba.
   
 
0.905
LOC106589285
Homeobox protein Hox-B6b-like.
   
 
0.905
hoxb5aa
Homeobox protein Hox-B5a-like.
   
 
0.809
hoxb4aa
Salmo salar homeobox protein HoxB4ab (hoxb4ab), mRNA.
   
 
0.809
hoxb5
Homeobox protein HoxB5ba.
   
 
0.809
LOC106589284
Homeobox protein Hox-B5b-like.
   
 
0.809
hoxc6ba
Homeobox protein HoxC6ba isoform X1.
   
 
0.773
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.